Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015791643.1_cds_XP_016508320.1_2067
CDS Infomation

[gene=LOC107825906] [db_xref=GeneID:107825906] [protein=subtilisin-like protease SBT5.3 isoform X2] [protein_id=XP_016508320.1] [location=complement(join(50603..51138,51294..51507,51595..51709,51816..52061,52160..52257,52424..52958,53337..53445,55108..55272,55504..55601,55694..55788))] [gbkey=CDS]
Sequence

ATGGGCGCACATTCACATGGAAAAGAAGTTTCATCCATTGATTATGATAGAGTAAGAGAT
TCACATCATGAGTTTCTTGGATCATACTTGGGAAGCACTGACAAGGCAAAAGAAGCAATT
TTCTACTCTTACACTAAACACATCAATGGCTTTTCTGCCATGCTTGAAGATGATGAAGCA
GTAGAAATTGCAAAGCATCCCCAAGTAGTATCAGTATTTCTAAACAGGGGAAGAAAACTA
CAGACAACAAGATCATGGAACTTTTTGGGATTGGAGAATGATGGAGTTATACATCCAAGT
TCATTATGGAAGAAGGCAAGATTTGGAGAAGATACAATTATTGGCAATCTTGATACTGGT
GCCTGGCCTGAATCAAAAAGCTTTATTGATGAAGAATTGGGACCAATTCCATCAAAGTGG
AGAGGAATTTGCCAAAATGATTCTGATCACACCTTTCAGTGCAATAGGAAGCTAATTGGA
GCAAGGTACTTCAACCAAGGATACGCGACTCTAGCAGGATCTCTAAATTCAAGTTTCAAC
ACACCACGAGACACGGATGGACACGGTTCCCACACATTGTCCACAGCCGGTGGAAATTTT
GTTCAGGGAGCAAGTGTTTTCGGGTATGGAAACGGAACAGCAAAGGGTGGATCACCAAAA
GCAAGAGTAGCAGCTTACCGAGTTTGTTGGCCTCCAATTATGGGCAATGAGTGCTTTGAT
TCAGATATCTTGGCTGCTTTTGATATGGCAATTCATGATGGCGTGGACGTGCTTTCGGTA
TCACTTGGAGGAGATGCTGGAGCATATGTCAATGACAGTGTTGCTATTGGTTCATTTCAT
GCTGTTAAGCATGGCATTGTTGTAGTCACCTCTGCTGGTAACTCTGGTCCTGGTCCTGGT
ACAGTATCAAATGTTGCACCTTGGCTCATAACCGTTGGCGCGAGCACTATGGATCGTCAG
TTTCCCAGCTATATCATCCTAGGAAACAAAAAGCAGTACAAAGGAGAAAGTCTTTCAGTT
GAAACACTGCCCAAAGGCAAGCTCTTCCCTATTATAAATGCTGCTTCGGCAAAAGCTCCC
CATGCTTCAACCGACGATGCACAATTATGCAAAGCTGGGGCACTGGACCCTAAGAAGGTA
AAGGGAACTATTTTAGTTTGCCTAAGAGGAGATAATGCAAGGGTTGACAAGGGACAGCAA
GCTGCTTTGGCTGGTGCAGTTGGAATGGTTCTAGCAAATGATTATGCGTCTGGGAATGAA
ATTATTGCTGATCCTCACGTCTTACCTGCTACGCAAATTAGTTACACTGATGGACTTGAA
CTCTTCGCTTATGTTAATTCAACAAGGACACCTACAGCTTCTATTACACATCCAAAAACT
CAACTTGGAACAAAGCCAGCTCCAGTCATGGCTGCCTTTTCATCGATAGGGCCAAACACT
GTTACGCCAGAATTTCTTAAGCCTGATATTACTGCTCCAGGAGTGAGTGTAATCGCTGCC
TATACTGGCGCTGAAGGTCCAACAAATCAAGATTTTGATAAACGTCGGGTTAAATTTAAC
TCAGTTTCAGGAACTTCTATGTCATGTCCTCATGTTTCTGGTATTGTTGGTCTTCTGAAA
ACCCTTTACCCTACTTGGAGTCCTTCTGCTATTAAATCTGCAATTATGACCACTGCGAGA
ACACGAGATAATGCTATAGAGCCAATGTTGAATGCTAGTTACATCAAAACAAGTCCATTT
GCTTATGGAGCAGGGCATGTACGGCCAAACCGTGCCATGGACCCTGGTTTGGTGTATGAC
TTGACTATCGATGATTATTTGAGCTTTCTCTGCGCTCAAGGCTACAATGAAACTCAAATC
AAGACATTTACACAAGGCCCTTTCAAATGCCCTGAGCCGATTAATTTCATTAACATGAAC
TTACCCTCAATTACAGTACCTAATCTCAATGGTTCAGTTACTGTTACTAGAACTTTGAAG
AATGTTGGATCTCCAGGTACATACAAAGCCTGTATTCGTCGCCCCATTGGAATTTCAGCT
GTTGTTGAGCCAAATAGTCTTGAGTTCAAGAATATTGGTGAGAAGAAATCATTCAAGCTT
ACTCTGAAGGTTAAAGGATCTAAAGGTCCAAAAGATTATGTATTTGGCCAGTTAATTTGG
TCATACGGTAAGCACTATGTTAGAAGTCCCATTGTAGTAAAATCCACATAG

Peptide Sequence

PEP ID

XP_016508320.1
PEP Infomation

PREDICTED: subtilisin-like protease SBT5.3 isoform X2 [Nicotiana tabacum]
Sequence

MGAHSHGKEVSSIDYDRVRDSHHEFLGSYLGSTDKAKEAIFYSYTKHINGFSAMLEDDEA
VEIAKHPQVVSVFLNRGRKLQTTRSWNFLGLENDGVIHPSSLWKKARFGEDTIIGNLDTG
AWPESKSFIDEELGPIPSKWRGICQNDSDHTFQCNRKLIGARYFNQGYATLAGSLNSSFN
TPRDTDGHGSHTLSTAGGNFVQGASVFGYGNGTAKGGSPKARVAAYRVCWPPIMGNECFD
SDILAAFDMAIHDGVDVLSVSLGGDAGAYVNDSVAIGSFHAVKHGIVVVTSAGNSGPGPG
TVSNVAPWLITVGASTMDRQFPSYIILGNKKQYKGESLSVETLPKGKLFPIINAASAKAP
HASTDDAQLCKAGALDPKKVKGTILVCLRGDNARVDKGQQAALAGAVGMVLANDYASGNE
IIADPHVLPATQISYTDGLELFAYVNSTRTPTASITHPKTQLGTKPAPVMAAFSSIGPNT
VTPEFLKPDITAPGVSVIAAYTGAEGPTNQDFDKRRVKFNSVSGTSMSCPHVSGIVGLLK
TLYPTWSPSAIKSAIMTTARTRDNAIEPMLNASYIKTSPFAYGAGHVRPNRAMDPGLVYD
LTIDDYLSFLCAQGYNETQIKTFTQGPFKCPEPINFINMNLPSITVPNLNGSVTVTRTLK
NVGSPGTYKACIRRPIGISAVVEPNSLEFKNIGEKKSFKLTLKVKGSKGPKDYVFGQLIW
SYGKHYVRSPIVVKST

Transcript Sequence

Gene sequence data has not been registered.